Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | SAMN05421504_103476 | Not Available | Negative | 3512760 - 3513638 | 30453.3 |
| threonine synthase | SAMN05421504_103477 | Not Available | Negative | 3513739 - 3514800 | 36300.4 |
| homoserine dehydrogenase | SAMN05421504_103478 | Not Available | Negative | 3514797 - 3516110 | 45243.0 |
| diaminopimelate decarboxylase | SAMN05421504_103479 | Not Available | Negative | 3516114 - 3517547 | 51337.8 |
| arginyl-trna synthetase | SAMN05421504_103480 | Not Available | Negative | 3517554 - 3519215 | 59823.9 |
| protein of unknown function | SAMN05421504_103481 | Not Available | Positive | 3519273 - 3519911 | 22634.9 |
| protein of unknown function | SAMN05421504_103482 | Not Available | Positive | 3519995 - 3520843 | 29777.1 |
| uncharacterized conserved protein, duf305 family | SAMN05421504_103483 | Not Available | Positive | 3520840 - 3521541 | 24949.0 |
| cobalt-zinc-cadmium efflux system protein | SAMN05421504_103484 | Not Available | Negative | 3521649 - 3522572 | 32159.2 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421504_103485 | Not Available | Negative | 3522734 - 3523291 | 21216.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
