Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | SAMN05421504_103356 | Not Available | Positive | 3390588 - 3392423 | 65676.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_103357 | Not Available | Negative | 3392478 - 3393368 | 31077.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421504_103358 | Not Available | Positive | 3393724 - 3394938 | 41680.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421504_103359 | Not Available | Positive | 3395388 - 3396845 | 52493.5 |
| dna-binding transcriptional activator of the sarp family | SAMN05421504_103360 | Not Available | Negative | 3396823 - 3400218 | 120787.0 |
| hypothetical protein | SAMN05421504_103361 | Not Available | Negative | 3400320 - 3400949 | 21386.4 |
| hypothetical protein | SAMN05421504_103362 | Not Available | Negative | 3400940 - 3402352 | 49648.1 |
| abc-2 type transport system atp-binding protein | SAMN05421504_103363 | Not Available | Negative | 3402349 - 3403059 | 25507.1 |
| ftsx-like permease family protein | SAMN05421504_103364 | Not Available | Negative | 3403093 - 3404307 | 41182.7 |
| hypothetical protein | SAMN05421504_103365 | Not Available | Negative | 3405149 - 3405628 | 17227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
