Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421504_103336 | Not Available | Negative | 3366948 - 3367643 | 25923.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421504_103337 | Not Available | Positive | 3367686 - 3368393 | 25542.3 |
| hypothetical protein | SAMN05421504_103338 | Not Available | Positive | 3368469 - 3368567 | 3447.51 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421504_103339 | Not Available | Positive | 3368654 - 3370039 | 49893.8 |
| component of the tol biopolymer transport system | SAMN05421504_103340 | Not Available | Negative | 3370018 - 3373110 | 111116.0 |
| hypothetical protein | SAMN05421504_103341 | Not Available | Positive | 3373205 - 3373582 | 13724.9 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | SAMN05421504_103342 | Not Available | Positive | 3374016 - 3375425 | 49763.8 |
| chitosanase | SAMN05421504_103343 | Not Available | Negative | 3375482 - 3376261 | 28174.9 |
| putative abc transport system atp-binding protein | SAMN05421504_103344 | Not Available | Positive | 3376792 - 3377562 | 27195.7 |
| putative abc transport system permease protein | SAMN05421504_103345 | Not Available | Positive | 3377562 - 3380102 | 88016.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
