Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_103306 | Not Available | Positive | 3315687 - 3316910 | 44038.6 |
| hypothetical protein | SAMN05421504_103307 | Not Available | Positive | 3316945 - 3317352 | 15139.0 |
| alpha-d-xyloside xylohydrolase | SAMN05421504_103308 | Not Available | Positive | 3317481 - 3319970 | 89920.4 |
| zinc carboxypeptidase | SAMN05421504_103309 | Not Available | Positive | 3320249 - 3322762 | 90153.3 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05421504_103310 | Not Available | Negative | 3322817 - 3323632 | 29695.1 |
| regulatory protein, tetr family | SAMN05421504_103311 | Not Available | Positive | 3323708 - 3324481 | 28059.2 |
| regulatory protein, luxr family | SAMN05421504_103312 | Not Available | Negative | 3324514 - 3327396 | 104217.0 |
| hypothetical protein | SAMN05421504_103313 | Not Available | Negative | 3327452 - 3327628 | 6065.07 |
| type 2 lantibiotic biosynthesis protein lanm | SAMN05421504_103314 | Not Available | Negative | 3327651 - 3330386 | 97088.6 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421504_103315 | Not Available | Positive | 3330638 - 3331300 | 23192.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
