Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 3223006 - 3223081 | Not Available |
| hypothetical protein | SAMN05421504_103227 | Not Available | Positive | 3223204 - 3224295 | 38783.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05421504_103228 | Not Available | Negative | 3224302 - 3224946 | 23765.2 |
| hypothetical protein | SAMN05421504_103229 | Not Available | Negative | 3225416 - 3225634 | 8017.46 |
| hypothetical protein | SAMN05421504_103230 | Not Available | Negative | 3225763 - 3226950 | 43455.6 |
| intein c-terminal splicing region | SAMN05421504_103231 | Not Available | Negative | 3226960 - 3231141 | 147004.0 |
| short repeat-containing protein of unknown function | SAMN05421504_103232 | Not Available | Negative | 3231285 - 3232364 | 38791.9 |
| ricin-type beta-trefoil lectin domain-containing protein | SAMN05421504_103233 | Not Available | Positive | 3232582 - 3234591 | 72361.6 |
| snoal-like domain-containing protein | SAMN05421504_103234 | Not Available | Negative | 3235067 - 3235510 | 16103.2 |
| hypothetical protein | SAMN05421504_103235 | Not Available | Positive | 3235690 - 3236145 | 15646.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
