Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421504_103146 | Not Available | Positive | 3140924 - 3141586 | 23914.1 |
| dna-binding transcriptional regulator, acrr family | SAMN05421504_103147 | Not Available | Negative | 3141616 - 3142200 | 21099.0 |
| agmatine deiminase | SAMN05421504_103148 | Not Available | Positive | 3142333 - 3143472 | 40253.3 |
| agmatine deiminase | SAMN05421504_103149 | Not Available | Negative | 3144170 - 3145318 | 40119.1 |
| dna-binding transcriptional regulator, acrr family | SAMN05421504_103150 | Not Available | Positive | 3145429 - 3146022 | 21766.8 |
| urease subunit alpha | SAMN05421504_103151 | Not Available | Negative | 3146026 - 3147705 | 58972.4 |
| urease subunit gamma/beta | SAMN05421504_103152 | Not Available | Negative | 3147702 - 3148388 | 24104.7 |
| oligopeptide/dipeptide transporter, c-terminal region | SAMN05421504_103153 | Not Available | Negative | 3148369 - 3149178 | 29088.7 |
| oligopeptide/dipeptide abc transporter, atp-binding protein, c-terminal domain-containing protein | SAMN05421504_103154 | Not Available | Negative | 3149175 - 3150143 | 34342.6 |
| peptide/nickel transport system permease protein | SAMN05421504_103155 | Not Available | Negative | 3150140 - 3150976 | 28904.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
