Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable f420-dependent oxidoreductase, rv2161c family | SAMN05421504_103126 | Not Available | Negative | 3122339 - 3123232 | 31985.2 |
| sterol 24-c-methyltransferase/24-methylenesterol c-methyltransferase | SAMN05421504_103127 | Not Available | Positive | 3123460 - 3124338 | 32168.4 |
| pap2 superfamily protein | SAMN05421504_103128 | Not Available | Positive | 3124401 - 3125078 | 24809.5 |
| tap-like protein | SAMN05421504_103129 | Not Available | Negative | 3125060 - 3126463 | 49900.6 |
| hypothetical protein | SAMN05421504_103130 | Not Available | Positive | 3126621 - 3127055 | 14238.1 |
| Trna-glu | Not Available | Not Available | Positive | 3127119 - 3127191 | Not Available |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421504_103132 | Not Available | Negative | 3127219 - 3127920 | 24737.9 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05421504_103133 | Not Available | Negative | 3127927 - 3128760 | 30350.1 |
| dna-binding transcriptional regulator, acrr family | SAMN05421504_103134 | Not Available | Positive | 3128857 - 3129441 | 21553.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_103135 | Not Available | Negative | 3129435 - 3130325 | 32332.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
