Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421504_1021146 | Not Available | Positive | 2913335 - 2914171 | 30281.4 |
| hypothetical protein | SAMN05421504_1021147 | Not Available | Negative | 2914168 - 2914632 | 16308.8 |
| hypothetical protein | SAMN05421504_1021148 | Not Available | Negative | 2914601 - 2914723 | 4246.1 |
| recb family nuclease, putative, tm0106 family | SAMN05421504_1021149 | Not Available | Positive | 2914800 - 2916365 | 57222.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_1021150 | Not Available | Negative | 2916479 - 2917240 | 26129.5 |
| udpglucose 6-dehydrogenase | SAMN05421504_1021151 | Not Available | Positive | 2917389 - 2918690 | 45496.5 |
| ribosomal protein s18 acetylase rimi | SAMN05421504_1021152 | Not Available | Positive | 2918707 - 2919192 | 17208.3 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05421504_1021153 | Not Available | Positive | 2919203 - 2920960 | 62628.6 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05421504_1021154 | Not Available | Negative | 2920957 - 2921835 | 31553.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_1021155 | Not Available | Negative | 2921828 - 2922379 | 20447.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
