Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN05421504_1021076 | Not Available | Positive | 2843662 - 2844192 | 18964.4 |
| membrane associated serine protease, rhomboid family | SAMN05421504_1021077 | Not Available | Positive | 2844245 - 2845204 | 34008.8 |
| ph domain-containing protein | SAMN05421504_1021078 | Not Available | Negative | 2845190 - 2845606 | 14567.8 |
| uncharacterised protein family (upf0233) | SAMN05421504_1021079 | Not Available | Negative | 2845691 - 2845957 | 9860.64 |
| lpxtg-site transpeptidase (sortase) family protein | SAMN05421504_1021080 | Not Available | Positive | 2846148 - 2847041 | 32225.9 |
| hypothetical protein | SAMN05421504_1021081 | Not Available | Positive | 2847041 - 2847196 | 5584.03 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05421504_1021082 | Not Available | Positive | 2847193 - 2848182 | 35617.7 |
| hypothetical protein | SAMN05421504_1021083 | Not Available | Negative | 2848151 - 2848543 | 14288.8 |
| abc-2 type transport system permease protein | SAMN05421504_1021084 | Not Available | Negative | 2848636 - 2849361 | 25028.7 |
| abc-2 type transport system atp-binding protein | SAMN05421504_1021085 | Not Available | Negative | 2849364 - 2850044 | 24296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
