Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05421504_102936 | Not Available | Positive | 2679790 - 2681535 | 61809.7 |
| two component transcriptional regulator, luxr family | SAMN05421504_102937 | Not Available | Positive | 2681532 - 2682185 | 23431.5 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | SAMN05421504_102938 | Not Available | Positive | 2682269 - 2683513 | 43859.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421504_102939 | Not Available | Negative | 2683612 - 2684298 | 23919.4 |
| arabinofuranosyltransferase | SAMN05421504_102940 | Not Available | Negative | 2684317 - 2686053 | 62592.0 |
| hypothetical protein | SAMN05421504_102941 | Not Available | Negative | 2686090 - 2686662 | 20602.3 |
| conserved repeat domain-containing protein | SAMN05421504_102942 | Not Available | Negative | 2686698 - 2691725 | 173878.0 |
| hypothetical protein | SAMN05421504_102943 | Not Available | Negative | 2692138 - 2694228 | 75305.8 |
| predicted arabinose efflux permease, mfs family | SAMN05421504_102944 | Not Available | Negative | 2694360 - 2695577 | 41386.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421504_102945 | Not Available | Positive | 2695664 - 2696299 | 22294.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
