Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN05421504_102865 | Not Available | Negative | 2607316 - 2609082 | 61538.2 |
| chaperonin groes | SAMN05421504_102866 | Not Available | Negative | 2609093 - 2609386 | 10723.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421504_102867 | Not Available | Negative | 2609435 - 2611258 | 64706.6 |
| hypothetical protein | SAMN05421504_102868 | Not Available | Negative | 2611509 - 2611850 | 11756.7 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421504_102869 | Not Available | Negative | 2611913 - 2612374 | 16896.6 |
| hypothetical protein | SAMN05421504_102870 | Not Available | Positive | 2612524 - 2612940 | 14588.7 |
| hypothetical protein | SAMN05421504_102871 | Not Available | Negative | 2612984 - 2615299 | 84603.8 |
| polar amino acid transport system atp-binding protein | SAMN05421504_102872 | Not Available | Negative | 2615355 - 2616131 | 28535.8 |
| polar amino acid transport system permease protein | SAMN05421504_102873 | Not Available | Negative | 2616128 - 2617084 | 34627.9 |
| polar amino acid transport system substrate-binding protein | SAMN05421504_102874 | Not Available | Negative | 2617109 - 2618047 | 32253.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
