Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted alpha-1,6-mannanase, gh76 family | SAMN05421504_102805 | Not Available | Negative | 2546803 - 2547771 | 34745.0 |
| anaerobic selenocysteine-containing dehydrogenase | SAMN05421504_102806 | Not Available | Positive | 2547821 - 2549971 | 76285.1 |
| trna g18 (ribose-2'-o)-methylase spou | SAMN05421504_102807 | Not Available | Negative | 2550038 - 2550697 | 24122.0 |
| protein of unknown function | SAMN05421504_102808 | Not Available | Negative | 2550712 - 2551101 | 14270.8 |
| orotate phosphoribosyltransferase | SAMN05421504_102809 | Not Available | Negative | 2551501 - 2552061 | 19666.7 |
| putative abc transport system permease protein | SAMN05421504_102810 | Not Available | Negative | 2552087 - 2554540 | 84238.5 |
| putative abc transport system atp-binding protein | SAMN05421504_102811 | Not Available | Negative | 2554540 - 2555292 | 26496.1 |
| hypothetical protein | SAMN05421504_102812 | Not Available | Negative | 2555452 - 2556216 | 27119.5 |
| hypothetical protein | SAMN05421504_102813 | Not Available | Positive | 2556283 - 2557341 | 35583.3 |
| hypothetical protein | SAMN05421504_102814 | Not Available | Negative | 2557420 - 2558166 | 26995.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
