Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN05421504_102665 | Not Available | Negative | 2419133 - 2420701 | 56360.3 |
| l,d-transpeptidase catalytic domain | SAMN05421504_102666 | Not Available | Positive | 2420808 - 2421239 | 15162.2 |
| phosphoribosylformylglycinamidine synthase | SAMN05421504_102667 | Not Available | Positive | 2421242 - 2421478 | 8564.29 |
| phosphoribosylformylglycinamidine synthase | SAMN05421504_102668 | Not Available | Positive | 2421475 - 2422152 | 24150.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421504_102669 | Not Available | Negative | 2422119 - 2422991 | 31528.5 |
| abc-type multidrug transport system, atpase and permease component | SAMN05421504_102670 | Not Available | Negative | 2423051 - 2424781 | 61540.3 |
| abc-type multidrug transport system, atpase and permease component | SAMN05421504_102671 | Not Available | Negative | 2424778 - 2426430 | 58086.8 |
| phosphoribosylformylglycinamidine synthase | SAMN05421504_102672 | Not Available | Positive | 2426480 - 2428690 | 78216.1 |
| pentapeptide repeat-containing protein | SAMN05421504_102673 | Not Available | Negative | 2428767 - 2429885 | 41240.2 |
| hypothetical protein | SAMN05421504_102674 | Not Available | Negative | 2429933 - 2430652 | 24609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
