Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421504_102605 | Not Available | Negative | 2362714 - 2365290 | 98154.3 |
| catechol 2,3-dioxygenase | SAMN05421504_102606 | Not Available | Positive | 2365455 - 2365829 | 13949.4 |
| uncharacterized protein, upf0303 family | SAMN05421504_102607 | Not Available | Positive | 2365873 - 2366343 | 17136.2 |
| hypothetical protein | SAMN05421504_102608 | Not Available | Negative | 2366422 - 2367387 | 32168.0 |
| putative spermidine/putrescine transport system permease protein | SAMN05421504_102609 | Not Available | Negative | 2367493 - 2368332 | 30261.0 |
| putative spermidine/putrescine transport system permease protein | SAMN05421504_102610 | Not Available | Negative | 2368329 - 2369210 | 31844.9 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05421504_102611 | Not Available | Negative | 2369234 - 2370292 | 37915.7 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05421504_102612 | Not Available | Negative | 2370299 - 2371582 | 46184.3 |
| dna-binding transcriptional regulator, gntr family | SAMN05421504_102613 | Not Available | Positive | 2371671 - 2372282 | 21687.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421504_102614 | Not Available | Positive | 2372279 - 2373187 | 32187.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
