Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 2311377 - 2311449 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2311472 - 2311548 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 2311586 - 2311659 | Not Available |
| s-adenosyl methyltransferase | SAMN05421504_102558 | Not Available | Positive | 2312392 - 2313213 | 29797.7 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421504_102559 | Not Available | Negative | 2313194 - 2314066 | 31431.3 |
| cytochrome p450 | SAMN05421504_102560 | Not Available | Negative | 2314054 - 2315277 | 44476.8 |
| prenyltransferase and squalene oxidase repeat-containing protein | SAMN05421504_102561 | Not Available | Negative | 2315274 - 2316731 | 51863.3 |
| ribbon-helix-helix protein, copg family | SAMN05421504_102562 | Not Available | Negative | 2316966 - 2317268 | 11306.5 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421504_102563 | Not Available | Negative | 2317635 - 2320415 | 101302.0 |
| hypothetical protein | SAMN05421504_102564 | Not Available | Negative | 2320510 - 2320710 | 7415.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
