Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN05421504_102545 | Not Available | Positive | 2303182 - 2304078 | 32661.2 |
| abc-2 type transport system permease protein | SAMN05421504_102546 | Not Available | Positive | 2304075 - 2305682 | 54926.9 |
| hypothetical protein | SAMN05421504_102547 | Not Available | Negative | 2305760 - 2306215 | 15399.2 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05421504_102548 | Not Available | Negative | 2306208 - 2306774 | 21052.2 |
| hypothetical protein | SAMN05421504_102549 | Not Available | Negative | 2306774 - 2307058 | 9352.35 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421504_102550 | Not Available | Negative | 2307210 - 2308370 | 41153.1 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421504_102551 | Not Available | Positive | 2308812 - 2309015 | 7473.71 |
| hypothetical protein | SAMN05421504_102552 | Not Available | Negative | 2309100 - 2309420 | 12017.8 |
| hypothetical protein | SAMN05421504_102553 | Not Available | Positive | 2310138 - 2310389 | 8840.39 |
| hypothetical protein | SAMN05421504_102554 | Not Available | Positive | 2310469 - 2311233 | 27814.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
