Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05421504_102484 | Not Available | Negative | 2246219 - 2247154 | 33305.5 |
| peptide/nickel transport system permease protein | SAMN05421504_102485 | Not Available | Negative | 2247151 - 2248161 | 36094.1 |
| peptide/nickel transport system substrate-binding protein | SAMN05421504_102486 | Not Available | Negative | 2248251 - 2249933 | 61238.0 |
| hypothetical protein | SAMN05421504_102487 | Not Available | Negative | 2250657 - 2251079 | 15477.3 |
| glycosyl transferase family 2 | SAMN05421504_102488 | Not Available | Negative | 2251088 - 2251831 | 26068.6 |
| hypothetical protein | SAMN05421504_102489 | Not Available | Negative | 2251948 - 2253909 | 69655.4 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421504_102490 | Not Available | Negative | 2253959 - 2255221 | 43356.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421504_102491 | Not Available | Negative | 2255218 - 2256234 | 36445.5 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | SAMN05421504_102492 | Not Available | Positive | 2256251 - 2257408 | 43362.5 |
| dna replication and repair protein recr | SAMN05421504_102493 | Not Available | Negative | 2257470 - 2258114 | 23403.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
