Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN05421504_102434 | Not Available | Negative | 2198600 - 2199190 | 20173.4 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05421504_102435 | Not Available | Negative | 2199187 - 2199957 | 28006.8 |
| hypothetical protein | SAMN05421504_102436 | Not Available | Positive | 2200082 - 2200333 | 9753.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421504_102437 | Not Available | Positive | 2200489 - 2201163 | 24893.0 |
| predicted arabinose efflux permease, mfs family | SAMN05421504_102438 | Not Available | Positive | 2201611 - 2202873 | 42848.3 |
| dna polymerase-3 subunit beta | SAMN05421504_102439 | Not Available | Positive | 2202883 - 2203971 | 37830.4 |
| glutaredoxin | SAMN05421504_102440 | Not Available | Negative | 2204037 - 2204303 | 9588.43 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421504_102441 | Not Available | Negative | 2204300 - 2205091 | 28382.7 |
| hypothetical protein | SAMN05421504_102442 | Not Available | Negative | 2205088 - 2205885 | 28484.9 |
| hypothetical protein | SAMN05421504_102443 | Not Available | Negative | 2205896 - 2206993 | 39312.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
