Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yheb, upf0754 family | SAMN05421504_102322 | Not Available | Positive | 2078750 - 2079979 | 46450.6 |
| uncharacterized membrane protein yheb, upf0754 family | SAMN05421504_102323 | Not Available | Positive | 2079995 - 2081260 | 48194.6 |
| protein of unknown function | SAMN05421504_102324 | Not Available | Positive | 2081344 - 2082567 | 45773.0 |
| sgnh hydrolase-like domain-containing protein, acetyltransferase algx | SAMN05421504_102325 | Not Available | Positive | 2082682 - 2083893 | 43569.6 |
| zinc/manganese transport system permease protein | SAMN05421504_102326 | Not Available | Negative | 2083850 - 2084725 | 29728.5 |
| zinc/manganese transport system atp-binding protein | SAMN05421504_102327 | Not Available | Negative | 2084722 - 2085558 | 29880.9 |
| zinc/manganese transport system substrate-binding protein | SAMN05421504_102328 | Not Available | Negative | 2085558 - 2086463 | 30589.8 |
| transcriptional regulator, laci family | SAMN05421504_102329 | Not Available | Positive | 2086626 - 2087774 | 41116.3 |
| carbonic anhydrase | SAMN05421504_102330 | Not Available | Positive | 2087869 - 2088360 | 18385.9 |
| a/g-specific adenine glycosylase | SAMN05421504_102331 | Not Available | Positive | 2088473 - 2089342 | 31411.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
