Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421504_102302 | Not Available | Positive | 2061750 - 2062610 | 30499.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421504_102303 | Not Available | Positive | 2062642 - 2063265 | 22449.7 |
| hypothetical protein | SAMN05421504_102304 | Not Available | Positive | 2063258 - 2064271 | 36894.5 |
| dna repair protein rada/sms | SAMN05421504_102305 | Not Available | Negative | 2064291 - 2065661 | 47481.4 |
| hypothetical protein | SAMN05421504_102306 | Not Available | Negative | 2065697 - 2066401 | 23177.3 |
| transcriptional regulator, card family | SAMN05421504_102307 | Not Available | Positive | 2066701 - 2067192 | 18100.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN05421504_102308 | Not Available | Positive | 2067404 - 2067853 | 15319.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05421504_102309 | Not Available | Positive | 2067850 - 2068314 | 15597.5 |
| ppox class probable f420-dependent enzyme | SAMN05421504_102310 | Not Available | Positive | 2068388 - 2068783 | 14615.3 |
| haloacid dehalogenase superfamily, subfamily ia, variant 2 with 3rd motif like haloacid dehalogenase/haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421504_102311 | Not Available | Positive | 2068826 - 2069497 | 24633.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
