Amycolatopsis xylanica strain CPCC 202699

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis xylanica strain CPCC 202699 is a Gram-positive, aerobic bacterium characterized by its non-motile nature. It possesses a single replicon and is capable of sporulation, allowing it to form spores under certain conditions. This strain operates optimally at a temperature of 29°C and falls within the mesophilic temperature range. The presence of flagella has been noted, which is a common feature in some bacterial species, although this strain is non-motile. The ability to form spores is significant for the survival of Amycolatopsis xylanica in fluctuating environmental conditions, allowing it to withstand stressors that might otherwise threaten its viability. The strain’s aerobic requirement suggests a reliance on oxygen for its metabolic processes, positioning it within ecosystems where oxygen is readily available. Given its characteristics, Amycolatopsis xylanica strain CPCC 202699 may play a role in decomposing organic matter in aerobic environments, contributing to nutrient cycling. Its spore-forming ability could enhance its ecological resilience and facilitate its dissemination in various habitats, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis xylanica
Strainstrain CPCC 202699

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis xylanica strain CPCC 202699 genome assembly, contig:

Gene Summary

Adenine Count

1469318 bp

Thymine Count

1456495 bp

Guanine Count

3232640 bp

Cytosine Count

3247627 bp

Genome Length

9406090 bp

Protein-coding Genes

8489 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05421504_102302Not AvailablePositive2061750 - 206261030499.4
rna polymerase sigma-70 factor, ecf subfamilySAMN05421504_102303Not AvailablePositive2062642 - 206326522449.7
hypothetical proteinSAMN05421504_102304Not AvailablePositive2063258 - 206427136894.5
dna repair protein rada/smsSAMN05421504_102305Not AvailableNegative2064291 - 206566147481.4
hypothetical proteinSAMN05421504_102306Not AvailableNegative2065697 - 206640123177.3
transcriptional regulator, card familySAMN05421504_102307Not AvailablePositive2066701 - 206719218100.7
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseSAMN05421504_102308Not AvailablePositive2067404 - 206785315319.6
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseSAMN05421504_102309Not AvailablePositive2067850 - 206831415597.5
ppox class probable f420-dependent enzymeSAMN05421504_102310Not AvailablePositive2068388 - 206878314615.3
haloacid dehalogenase superfamily, subfamily ia, variant 2 with 3rd motif like haloacid dehalogenase/haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN05421504_102311Not AvailablePositive2068826 - 206949724633.2

Displaying genes 1841 – 1850 of 8572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.