Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr cell envelope-related transcriptional attenuator | SAMN05421504_102200 | Not Available | Negative | 1947418 - 1948044 | 20633.9 |
| protein of unknown function | SAMN05421504_102201 | Not Available | Negative | 1948041 - 1948352 | 11805.2 |
| peptide deformylase | SAMN05421504_102202 | Not Available | Positive | 1948492 - 1949067 | 21268.7 |
| glucoamylase | SAMN05421504_102203 | Not Available | Negative | 1949367 - 1951535 | 77840.9 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05421504_102204 | Not Available | Positive | 1951712 - 1952635 | 31119.5 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN05421504_102205 | Not Available | Negative | 1952632 - 1953201 | 20831.1 |
| phosphomethylpyrimidine synthase | SAMN05421504_102207 | Not Available | Positive | 1953504 - 1955108 | 59659.5 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN05421504_102208 | Not Available | Positive | 1955105 - 1955917 | 27943.4 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421504_102209 | Not Available | Negative | 1955984 - 1956373 | 14829.7 |
| nadph:quinone reductase | SAMN05421504_102210 | Not Available | Positive | 1956468 - 1957373 | 31666.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
