Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05421504_10290 | Not Available | Positive | 1836405 - 1837580 | 41594.6 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421504_10291 | Not Available | Positive | 1837577 - 1838194 | 21619.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421504_10292 | Not Available | Positive | 1838220 - 1839578 | 48149.0 |
| phosphoserine aminotransferase apoenzyme | SAMN05421504_10293 | Not Available | Positive | 1840217 - 1841344 | 40064.1 |
| alpha-1,2-mannosyltransferase | SAMN05421504_10294 | Not Available | Negative | 1841255 - 1842490 | 44049.1 |
| chrd domain-containing protein | SAMN05421504_10295 | Not Available | Positive | 1842658 - 1843602 | 31771.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421504_10296 | Not Available | Negative | 1843655 - 1845160 | 54675.8 |
| putative abc transport system permease protein | SAMN05421504_10297 | Not Available | Negative | 1845245 - 1846363 | 38013.6 |
| putative abc transport system atp-binding protein | SAMN05421504_10298 | Not Available | Negative | 1846450 - 1847142 | 24236.5 |
| putative peptidoglycan binding domain-containing protein | SAMN05421504_10299 | Not Available | Negative | 1847139 - 1848230 | 37318.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
