Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | SAMN05421504_1011537 | Not Available | Negative | 1744564 - 1745265 | 25509.3 |
| integrase core domain-containing protein | SAMN05421504_1021 | Not Available | Positive | 1745266 - 1745557 | 10818.7 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421504_1022 | Not Available | Negative | 1745615 - 1746895 | 43995.1 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421504_1023 | Not Available | Positive | 1746934 - 1748166 | 42388.2 |
| beta-glucanase, gh16 family | SAMN05421504_1024 | Not Available | Positive | 1748265 - 1750505 | 76996.8 |
| glucosylceramidase | SAMN05421504_1025 | Not Available | Positive | 1750502 - 1752346 | 65865.5 |
| ricin-type beta-trefoil lectin domain-containing protein | SAMN05421504_1026 | Not Available | Positive | 1752358 - 1753710 | 46753.6 |
| l-threonine aldolase | SAMN05421504_1027 | Not Available | Positive | 1753808 - 1754884 | 39137.6 |
| dna-binding transcriptional regulator, gntr family | SAMN05421504_1028 | Not Available | Negative | 1754928 - 1755629 | 25941.9 |
| predicted arabinose efflux permease, mfs family | SAMN05421504_1029 | Not Available | Positive | 1755766 - 1757013 | 44344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
