Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421504_1011487 | Not Available | Positive | 1678340 - 1678816 | 17420.3 |
| hypothetical protein | SAMN05421504_1011488 | Not Available | Negative | 1679150 - 1680304 | 41925.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421504_1011489 | Not Available | Negative | 1680331 - 1681338 | 36564.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421504_1011490 | Not Available | Positive | 1681392 - 1682519 | 41868.8 |
| diguanylate cyclase, ggdef domain | SAMN05421504_1011491 | Not Available | Negative | 1682531 - 1683652 | 41222.3 |
| deoxyribodipyrimidine photolyase-related protein | SAMN05421504_1011492 | Not Available | Positive | 1683837 - 1685333 | 55887.6 |
| lgfp repeat-containing protein | SAMN05421504_1011493 | Not Available | Negative | 1685406 - 1688300 | 106528.0 |
| ricin-type beta-trefoil lectin domain-containing protein | SAMN05421504_1011494 | Not Available | Negative | 1688297 - 1689175 | 31565.2 |
| peroxiredoxin, ohr subfamily | SAMN05421504_1011495 | Not Available | Negative | 1689334 - 1689750 | 14362.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421504_1011496 | Not Available | Negative | 1689753 - 1690697 | 33572.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
