Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase subunit b | SAMN05421504_1011427 | Not Available | Negative | 1605326 - 1605976 | 22196.8 |
| 3-oxoacid coa-transferase subunit a | SAMN05421504_1011428 | Not Available | Negative | 1605976 - 1606755 | 27120.2 |
| d-mannose binding lectin | SAMN05421504_1011429 | Not Available | Negative | 1606908 - 1607417 | 18276.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421504_1011430 | Not Available | Negative | 1607726 - 1609222 | 53223.2 |
| predicted atpase | SAMN05421504_1011431 | Not Available | Positive | 1609352 - 1612510 | 112877.0 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05421504_1011432 | Not Available | Negative | 1612485 - 1613687 | 42080.2 |
| helix-turn-helix domain-containing protein | SAMN05421504_1011433 | Not Available | Negative | 1613711 - 1614556 | 31761.8 |
| short-chain dehydrogenase involved in d-alanine esterification of teichoic acids | SAMN05421504_1011434 | Not Available | Positive | 1614656 - 1615417 | 27384.8 |
| glycosyl hydrolase catalytic core | SAMN05421504_1011435 | Not Available | Positive | 1615529 - 1616335 | 28955.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05421504_1011436 | Not Available | Negative | 1616317 - 1617234 | 33429.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
