Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin carboxylase | SAMN05421504_1011407 | Not Available | Positive | 1584334 - 1585521 | 42096.5 |
| hypothetical protein | SAMN05421504_1011408 | Not Available | Positive | 1585569 - 1585859 | 10312.2 |
| ribosomal protein s12 methylthiotransferase rimo | SAMN05421504_1011409 | Not Available | Positive | 1585868 - 1587235 | 48466.5 |
| hypothetical protein | SAMN05421504_1011410 | Not Available | Negative | 1587304 - 1588362 | 38082.6 |
| astacin (peptidase family m12a) | SAMN05421504_1011411 | Not Available | Negative | 1588464 - 1589018 | 20650.2 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05421504_1011412 | Not Available | Negative | 1589148 - 1590287 | 38905.4 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05421504_1011413 | Not Available | Positive | 1590366 - 1591031 | 24268.8 |
| acetyl esterase/lipase | SAMN05421504_1011414 | Not Available | Positive | 1591114 - 1592061 | 33120.5 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05421504_1011415 | Not Available | Negative | 1592133 - 1593245 | 38630.4 |
| dihydrofolate reductase | SAMN05421504_1011416 | Not Available | Negative | 1593255 - 1593854 | 20877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
