Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-mannosidase, putative | SAMN05421504_1011276 | Not Available | Positive | 1430174 - 1433200 | 112745.0 |
| uncharacterized membrane protein yccc | SAMN05421504_1011277 | Not Available | Positive | 1433197 - 1435248 | 73547.9 |
| malate dehydrogenase | SAMN05421504_1011278 | Not Available | Positive | 1435770 - 1436759 | 34286.7 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421504_1011279 | Not Available | Positive | 1437465 - 1438127 | 23749.8 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421504_1011280 | Not Available | Negative | 1438141 - 1439013 | 31578.9 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05421504_1011281 | Not Available | Positive | 1439210 - 1440361 | 40089.5 |
| glycosyltransferase | SAMN05421504_1011282 | Not Available | Positive | 1440387 - 1441550 | 41238.8 |
| glycosyltransferase | SAMN05421504_1011283 | Not Available | Positive | 1441566 - 1442717 | 40548.1 |
| glycosyltransferase | SAMN05421504_1011284 | Not Available | Positive | 1442753 - 1443907 | 40347.0 |
| glycosyltransferase | SAMN05421504_1011285 | Not Available | Positive | 1443912 - 1445066 | 40683.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
