Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein (putative glucokinase) | SAMN05421504_10198 | Not Available | Positive | 112104 - 113306 | 41244.7 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05421504_10199 | Not Available | Positive | 113512 - 114705 | 40415.1 |
| ribose transport system atp-binding protein | SAMN05421504_101100 | Not Available | Positive | 114702 - 116201 | 53142.3 |
| ribose transport system permease protein | SAMN05421504_101101 | Not Available | Positive | 116198 - 117211 | 35224.9 |
| ribose transport system substrate-binding protein | SAMN05421504_101102 | Not Available | Positive | 117208 - 118257 | 36299.2 |
| predicted dehydrogenase | SAMN05421504_101103 | Not Available | Positive | 118317 - 119462 | 40883.4 |
| myo-inositol-1-phosphate synthase | SAMN05421504_101104 | Not Available | Positive | 119568 - 120725 | 40363.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421504_101105 | Not Available | Positive | 120722 - 121555 | 27513.8 |
| sugar phosphate isomerase/epimerase | SAMN05421504_101106 | Not Available | Positive | 121552 - 122970 | 50952.8 |
| hypothetical protein | SAMN05421504_101107 | Not Available | Positive | 122973 - 123836 | 32060.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
