Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421504_1011156 | Not Available | Negative | 1296210 - 1296791 | 21219.1 |
| dna-binding transcriptional regulator, acrr family | SAMN05421504_1011157 | Not Available | Negative | 1296791 - 1297345 | 19668.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_1011158 | Not Available | Negative | 1297378 - 1297983 | 20709.9 |
| helix-turn-helix domain-containing protein | SAMN05421504_1011159 | Not Available | Negative | 1297980 - 1298810 | 30076.0 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05421504_1011160 | Not Available | Negative | 1298880 - 1299725 | 30705.8 |
| abc-type multidrug transport system, atpase and permease component | SAMN05421504_1011161 | Not Available | Positive | 1299913 - 1301571 | 58569.4 |
| atp-binding cassette, subfamily c | SAMN05421504_1011162 | Not Available | Positive | 1301568 - 1303271 | 59378.8 |
| streptomycin 6-kinase | SAMN05421504_1011163 | Not Available | Positive | 1303369 - 1304040 | 24425.7 |
| pentapeptide repeat-containing protein | SAMN05421504_1011164 | Not Available | Negative | 1304048 - 1304626 | 20691.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421504_1011165 | Not Available | Negative | 1304829 - 1305788 | 34543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
