Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis xylanica |
| Strain | strain CPCC 202699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1469318 bp
Thymine Count
1456495 bp
Guanine Count
3232640 bp
Cytosine Count
3247627 bp
Genome Length
9406090 bp
Protein-coding Genes
8489 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421504_1011047 | Not Available | Negative | 1190798 - 1191532 | 24350.3 |
| aldo/keto reductase family protein | SAMN05421504_1011048 | Not Available | Positive | 1192023 - 1192526 | 17544.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421504_1011049 | Not Available | Negative | 1192590 - 1193306 | 24307.3 |
| peptide/nickel transport system permease protein | SAMN05421504_1011050 | Not Available | Negative | 1193319 - 1194224 | 31687.1 |
| peptide/nickel transport system permease protein | SAMN05421504_1011051 | Not Available | Negative | 1194221 - 1195165 | 34053.9 |
| peptide/nickel transport system substrate-binding protein | SAMN05421504_1011052 | Not Available | Negative | 1195162 - 1196742 | 56958.4 |
| peptide/nickel transport system atp-binding protein/glutathione transport system atp-binding protein | SAMN05421504_1011053 | Not Available | Negative | 1196739 - 1198499 | 63820.7 |
| o-methyltransferase | SAMN05421504_1011054 | Not Available | Positive | 1198733 - 1199719 | 35012.6 |
| acetyl esterase | SAMN05421504_1011055 | Not Available | Positive | 1199716 - 1200642 | 32732.7 |
| transcriptional regulator, tetr family | SAMN05421504_1011056 | Not Available | Negative | 1200966 - 1201553 | 22046.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
