Thiocapsa roseopersicina strain DSM 217

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Thiocapsa

Description

Thiocapsa roseopersicina strain DSM 217 is an anaerobic bacterium characterized by its single replicon structure. This organism is noted for its ability to thrive in environments devoid of oxygen, which is a significant aspect of its ecological niche. The strain is cataloged under the accession number FNNZ00000000.1, indicating its availability for research and study. As an anaerobe, Thiocapsa roseopersicina plays a crucial role in sulfur cycling in its habitat. Its metabolic processes are likely linked to the reduction of sulfur compounds, which can impact the surrounding ecosystem by influencing nutrient availability and the overall chemical dynamics of the environment. The strain's adaptation to anaerobic conditions allows it to occupy ecological niches that are inhospitable to aerobic organisms, thereby contributing to the diversity of microbial communities. In summary, Thiocapsa roseopersicina strain DSM 217 exemplifies a specialized anaerobic lifestyle, marked by its single replicon and specific accession for further exploration. Its role in sulfur metabolism underscores its ecological significance, highlighting the importance of anaerobic microorganisms in maintaining the balance of biochemical cycles in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusThiocapsa
SpeciesThiocapsa roseopersicina
Strainstrain DSM 217

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Thiocapsa roseopersicina strain DSM 217
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatagricultural soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiocapsa roseopersicina strain DSM 217 genome assembly, contig:

Gene Summary

Adenine Count

966082 bp

Thymine Count

955847 bp

Guanine Count

1728444 bp

Cytosine Count

1735752 bp

Genome Length

5386125 bp

Protein-coding Genes

4864 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease hiSAMN05421783_10186Not AvailablePositive98081 - 9851216244.5
dna polymerase-3 subunit epsilonSAMN05421783_10187Not AvailablePositive98702 - 9942426244.2
transcriptional regulator, crp/fnr familySAMN05421783_10188Not AvailableNegative99629 - 10038728241.2
ctp synthaseSAMN05421783_10189Not AvailablePositive100800 - 10244361269.6
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)SAMN05421783_10190Not AvailablePositive102440 - 10327629823.0
enolaseSAMN05421783_10191Not AvailablePositive103509 - 10478645145.6
cell division protein ftsbSAMN05421783_10192Not AvailablePositive104755 - 10515615030.5
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseSAMN05421783_10193Not AvailablePositive105153 - 10586325736.7
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseSAMN05421783_10194Not AvailablePositive105964 - 10643716389.8
trna pseudouridine13 synthaseSAMN05421783_10195Not AvailablePositive106439 - 10751239335.8

Displaying genes 111 – 120 of 4930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0034724LycopeneC40H56Chemical structure of LycopeneNULL
Average536.8726Da
Monoisotopic536.438201792Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.