Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Caryophanales
Family
Paenibacillaceae
Genus
Paenibacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Caryophanales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus sp. PDC88 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1641785 bp
Thymine Count
1646321 bp
Guanine Count
1358012 bp
Cytosine Count
1382562 bp
Genome Length
6028771 bp
Protein-coding Genes
5512 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (r)-citramalate synthase | SAMN05518848_101621 | Not Available | Positive | 685033 - 686649 | 59156.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN05518848_101622 | Not Available | Negative | 686712 - 687272 | 20739.1 |
| jab domain-containing protein | SAMN05518848_101623 | Not Available | Positive | 687517 - 687942 | 16035.4 |
| dna polymerase-3 subunit epsilon | SAMN05518848_101624 | Not Available | Negative | 687928 - 688665 | 27381.9 |
| cbs domain-containing protein | SAMN05518848_101625 | Not Available | Negative | 688662 - 689744 | 41010.2 |
| dna-binding transcriptional regulator, merr family | SAMN05518848_101626 | Not Available | Positive | 690182 - 690610 | 16530.2 |
| hypothetical protein | SAMN05518848_101627 | Not Available | Positive | 690646 - 691314 | 24835.4 |
| lysr family transcriptional regulator, transcription activator of glutamate synthase operon | SAMN05518848_101628 | Not Available | Negative | 691339 - 692250 | 34361.8 |
| membrane associated serine protease, rhomboid family | SAMN05518848_101629 | Not Available | Negative | 692343 - 692990 | 24243.0 |
| thiol peroxidase (atypical 2-cys peroxiredoxin) | SAMN05518848_101630 | Not Available | Positive | 693057 - 693575 | 18777.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

