Paenibacillus sp. PDC88

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. PDC88 is a member of the Paenibacillus genus, characterized by having a single replicon. This trait indicates a streamlined genomic structure, which may contribute to its adaptability and efficiency in various environments. The genome of Paenibacillus sp. PDC88 is cataloged under the accession number FNNT00000000.1, which serves as a reference for further studies and analyses. Paenibacillus species are known for their diverse metabolic capabilities and roles in soil ecosystems. They can participate in nitrogen fixation, organic matter decomposition, and interactions with plant roots, potentially enhancing soil fertility and plant growth. The ecological significance of Paenibacillus sp. PDC88 may lie in its ability to contribute to nutrient cycling and improve soil health. In summary, the unique genomic characteristic of having a single replicon and the established taxonomy within the Paenibacillus genus highlight the potential importance of Paenibacillus sp. PDC88 in ecological processes. Its role in soil ecosystems could be pivotal in promoting plant health and maintaining environmental balance. Further studies are necessary to fully understand its specific functions and applications in microbial ecology and agriculture.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. PDC88
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. PDC88 genome assembly, contig: Ga0115487_135,

Gene Summary

Adenine Count

1641785 bp

Thymine Count

1646321 bp

Guanine Count

1358012 bp

Cytosine Count

1382562 bp

Genome Length

6028771 bp

Protein-coding Genes

5512 genes

Non-Coding Genes

282 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phytoene desaturaseSAMN05518848_103135Not AvailableNegative2345603 - 234708155308.0
glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthaseSAMN05518848_103136Not AvailableNegative2347081 - 234829544245.4
acyltransferaseSAMN05518848_103137Not AvailableNegative2348298 - 234903528543.4
putative membrane proteinSAMN05518848_103138Not AvailableNegative2349004 - 234977428786.6
phytoene synthaseSAMN05518848_103139Not AvailableNegative2349776 - 235064833420.1
phytoene desaturaseSAMN05518848_103140Not AvailableNegative2350649 - 235210954243.4
phytoene desaturaseSAMN05518848_103141Not AvailableNegative2352106 - 235365658577.3
pld-like domain-containing proteinSAMN05518848_103142Not AvailablePositive2354029 - 235559159184.5
transcriptional regulator, tetr familySAMN05518848_103143Not AvailablePositive2355729 - 235632222954.4
paired small multidrug resistance pumpSAMN05518848_103144Not AvailablePositive2356319 - 235666912463.7

Displaying genes 2371 – 2380 of 5794 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.