Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Caryophanales
Family
Paenibacillaceae
Genus
Paenibacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Caryophanales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus sp. PDC88 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1641785 bp
Thymine Count
1646321 bp
Guanine Count
1358012 bp
Cytosine Count
1382562 bp
Genome Length
6028771 bp
Protein-coding Genes
5512 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | SAMN05518848_102416 | Not Available | Negative | 1676126 - 1676680 | 20592.1 |
| methionine synthase (b12-dependent) | SAMN05518848_102417 | Not Available | Positive | 1676880 - 1680320 | 126367.0 |
| ribonuclease z | SAMN05518848_102418 | Not Available | Positive | 1680583 - 1681500 | 33710.4 |
| 4-nitrophenyl phosphatase | SAMN05518848_102419 | Not Available | Positive | 1681630 - 1682412 | 27559.8 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN05518848_102420 | Not Available | Positive | 1682467 - 1683294 | 31193.7 |
| endonuclease iv | SAMN05518848_102421 | Not Available | Positive | 1683296 - 1684138 | 31025.6 |
| hypothetical protein | SAMN05518848_102422 | Not Available | Positive | 1684159 - 1684500 | 12871.2 |
| thioredoxin | SAMN05518848_102423 | Not Available | Positive | 1684502 - 1684816 | 11879.7 |
| iron complex transport system atp-binding protein | SAMN05518848_102424 | Not Available | Positive | 1684813 - 1685586 | 29204.8 |
| 23s rrna (cytidine2498-2'-o)-methyltransferase | SAMN05518848_102425 | Not Available | Positive | 1685593 - 1686642 | 39277.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

