Hydrobacter penzbergensis strain DSM 25353

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Hydrobacter

Description

Hydrobacter penzbergensis strain DSM 25353 is characterized by having a single replicon. This trait is significant as it indicates a streamlined genomic structure, which can impact the organism's adaptability and replication efficiency. The strain is cataloged under the accession number FNNO00000000.1, allowing for easier reference and further research within microbial databases. As a member of the genus Hydrobacter, this strain contributes to our understanding of microbial diversity in various ecological niches. Although specific metabolic capabilities and ecological roles of Hydrobacter penzbergensis are not detailed in the available data, members of the Hydrobacter genus are generally known for their potential applications in environmental biotechnology, particularly in bioremediation processes. The presence of a single replicon may also suggest that Hydrobacter penzbergensis strain DSM 25353 can maintain a stable genome, which could be advantageous for survival in fluctuating environments. This genomic stability could facilitate the organism's role in nutrient cycling or other ecological functions, although specific interactions or contributions to its ecosystem are not documented in the provided evidence. In conclusion, while further investigation is necessary to fully elucidate the ecological implications of Hydrobacter penzbergensis strain DSM 25353, its single replicon structure may play a crucial role in its adaptability and potential environmental applications.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusHydrobacter
SpeciesHydrobacter penzbergensis
Strainstrain DSM 25353

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrobacter penzbergensis strain DSM 25353 genome assembly,

Gene Summary

Adenine Count

1076546 bp

Thymine Count

1096056 bp

Guanine Count

883842 bp

Cytosine Count

905065 bp

Genome Length

3961509 bp

Protein-coding Genes

3503 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane proteinSAMN05444410_10950Not AvailableNegative2443667 - 244431725098.4
undecaprenol kinase/diacylglycerol kinase (atp)SAMN05444410_10951Not AvailableNegative2444314 - 244467613176.8
dihydroorotate oxidase aSAMN05444410_10952Not AvailableNegative2444732 - 244582039503.7
acetyl-coa acyltransferaseSAMN05444410_10953Not AvailablePositive2445871 - 244704641381.4
nucleotide-binding universal stress protein, uspa familySAMN05444410_10954Not AvailablePositive2447048 - 244787530216.5
nh(3)-dependent nad(+) synthetaseSAMN05444410_10955Not AvailableNegative2447876 - 244958563535.5
hypothetical proteinSAMN05444410_10956Not AvailablePositive2449629 - 245063338079.4
apag proteinSAMN05444410_10957Not AvailableNegative2450642 - 245102814803.5
protein involved in polysaccharide export, contains slbb domain of the beta-grasp foldSAMN05444410_10958Not AvailablePositive2451354 - 245375688222.9
isocitrate dehydrogenaseSAMN05444410_10959Not AvailablePositive2453823 - 245527753260.1

Displaying genes 2211 – 2220 of 3546 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.