Hydrobacter penzbergensis strain DSM 25353

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Hydrobacter

Description

Hydrobacter penzbergensis strain DSM 25353 is characterized by having a single replicon. This trait is significant as it indicates a streamlined genomic structure, which can impact the organism's adaptability and replication efficiency. The strain is cataloged under the accession number FNNO00000000.1, allowing for easier reference and further research within microbial databases. As a member of the genus Hydrobacter, this strain contributes to our understanding of microbial diversity in various ecological niches. Although specific metabolic capabilities and ecological roles of Hydrobacter penzbergensis are not detailed in the available data, members of the Hydrobacter genus are generally known for their potential applications in environmental biotechnology, particularly in bioremediation processes. The presence of a single replicon may also suggest that Hydrobacter penzbergensis strain DSM 25353 can maintain a stable genome, which could be advantageous for survival in fluctuating environments. This genomic stability could facilitate the organism's role in nutrient cycling or other ecological functions, although specific interactions or contributions to its ecosystem are not documented in the provided evidence. In conclusion, while further investigation is necessary to fully elucidate the ecological implications of Hydrobacter penzbergensis strain DSM 25353, its single replicon structure may play a crucial role in its adaptability and potential environmental applications.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusHydrobacter
SpeciesHydrobacter penzbergensis
Strainstrain DSM 25353

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrobacter penzbergensis strain DSM 25353 genome assembly,

Gene Summary

Adenine Count

1076546 bp

Thymine Count

1096056 bp

Guanine Count

883842 bp

Cytosine Count

905065 bp

Genome Length

3961509 bp

Protein-coding Genes

3503 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gluconate 2-dehydrogenase subunit 3SAMN05444410_10588Not AvailablePositive1628084 - 162865621084.3
sugar phosphate isomerase/epimeraseSAMN05444410_10589Not AvailablePositive1628738 - 162961032368.5
oxidoreductase family, nad-binding rossmann foldSAMN05444410_10590Not AvailableNegative1629682 - 163118455764.4
putative redox proteinSAMN05444410_10591Not AvailablePositive1631329 - 163198524979.7
atp-dependent dna helicase recqSAMN05444410_10592Not AvailableNegative1631987 - 163428186256.9
arabinose-5-phosphate isomeraseSAMN05444410_10593Not AvailablePositive1634478 - 163544034549.0
mannose-1-phosphate guanylyltransferaseSAMN05444410_10594Not AvailablePositive1635494 - 163657640584.9
arylsulfatase aSAMN05444410_10595Not AvailablePositive1636658 - 163818155695.5
alpha-l-fucosidase 2SAMN05444410_10596Not AvailablePositive1638196 - 164057187327.5
arylsulfatase aSAMN05444410_10597Not AvailablePositive1640568 - 164210959423.8

Displaying genes 1451 – 1460 of 3546 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.