Ruegeria mobilis strain DSM 23403

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Tritonibacter

Description

Ruegeria mobilis strain DSM 23403 is a marine bacterium characterized by its single replicon structure. This strain is cataloged under the accession number FNNK00000000.1, which serves as a reference for its genomic information. Ruegeria mobilis is part of the larger family of marine Alphaproteobacteria and is notable for its ecological role in marine environments. The single replicon indicates a streamlined genomic organization, which can be advantageous for adaptability and efficiency in nutrient uptake, particularly in fluctuating marine conditions. This strain's unique traits suggest that it may play a role in biogeochemical cycling in marine ecosystems, contributing to processes such as the degradation of organic matter and the cycling of nutrients. The presence of Ruegeria mobilis in marine habitats highlights the importance of microbial diversity in maintaining ocean health and stability. Overall, the genomic characteristics and ecological implications of Ruegeria mobilis strain DSM 23403 underscore its potential significance in marine microbiology and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusTritonibacter
SpeciesTritonibacter mobilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria mobilis strain DSM 23403 genome assembly, contig:

Gene Summary

Adenine Count

970992 bp

Thymine Count

961588 bp

Guanine Count

1386869 bp

Cytosine Count

1394203 bp

Genome Length

4713652 bp

Protein-coding Genes

4445 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
caspase domain-containing proteinSAMN05444385_11477Not AvailableNegative4063623 - 4068476181120.0
papain family cysteine proteaseSAMN05444385_11478Not AvailableNegative4068496 - 407026563082.9
putative tricarboxylic transport membrane proteinSAMN05444385_11479Not AvailableNegative4070689 - 407218551004.2
tripartite tricarboxylate transporter tctb family proteinSAMN05444385_11480Not AvailableNegative4072199 - 407263615008.9
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05444385_11481Not AvailableNegative4072633 - 407358032435.6
gntr family transcriptional regulatorSAMN05444385_11482Not AvailableNegative4073625 - 407435327108.0
predicted metal-dependent hydrolase, tim-barrel foldSAMN05444385_11483Not AvailablePositive4074446 - 407522228468.1
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN05444385_11484Not AvailableNegative4075243 - 407596226690.2
pimeloyl-acp methyl ester carboxylesteraseSAMN05444385_11485Not AvailablePositive4076048 - 407698035167.1
hypothetical proteinSAMN05444385_11486Not AvailableNegative4077274 - 40774175099.4

Displaying genes 3911 – 3920 of 4555 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.