Pseudoxanthomonas sp. CF385

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas sp. CF385 is a rod-shaped bacterium characterized by its unique genetic makeup, being classified with a single replicon. The organism is cataloged under the accession number FNKZ00000000.1, which indicates its genetic sequence has been documented in a biological database, allowing for further research and analysis. The rod shape of Pseudoxanthomonas sp. CF385 suggests a potential adaptability to various environments, as many rod-shaped bacteria are known for their efficient nutrient absorption and motility. The presence of a single replicon can also indicate a streamlined genomic structure, which may contribute to the organism's adaptability and functional efficiency in diverse ecological niches. Understanding the characteristics of Pseudoxanthomonas sp. CF385 can provide valuable insights into its ecological roles. As members of the Pseudoxanthomonas genus are often associated with soil and aquatic environments, this bacterium may play a role in nutrient cycling and microbial interactions within these ecosystems. The study of its physiology and genetics could further illuminate its functional capabilities and contributions to ecological dynamics, particularly in environments where these bacteria thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas sp. CF385
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas sp. CF385 genome assembly, contig: Ga0115495_17,

Gene Summary

Adenine Count

625623 bp

Thymine Count

618626 bp

Guanine Count

1313387 bp

Cytosine Count

1317812 bp

Genome Length

3875448 bp

Protein-coding Genes

3548 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ef handSAMN05428982_0011Not AvailableNegative11611 - 1194312375.8
iron complex transport system atp-binding proteinSAMN05428982_0012Not AvailablePositive12030 - 1286330244.7
dna-(apurinic or apyrimidinic site) lyaseSAMN05428982_0013Not AvailablePositive12856 - 1368329998.4
rna polymerase, sigma subunit, ecf familySAMN05428982_0014Not AvailablePositive13768 - 1433421194.3
serine/threonine protein kinaseSAMN05428982_0015Not AvailablePositive14354 - 17158103443.0
thymidine kinaseSAMN05428982_0016Not AvailableNegative17166 - 1778923062.7
hypothetical proteinSAMN05428982_0017Not AvailableNegative17812 - 1853726970.3
atp-dependent dna helicase repSAMN05428982_0018Not AvailablePositive18631 - 2060773108.9
hypothetical proteinSAMN05428982_0019Not AvailablePositive20669 - 2104913304.9
hypothetical proteinSAMN05428982_0020Not AvailablePositive21069 - 2144313264.0

Displaying genes 11 – 20 of 3607 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.