Paraburkholderia tuberum strain DUS833

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia tuberum strain DUS833 is an aerobic, rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility in aerobic environments. This strain is notable for having a single replicon, indicating a streamlined genetic structure. The genome of Paraburkholderia tuberum DUS833 can be referenced through the accession number FNKX00000000.1, providing a resource for further genomic studies and annotations. The aerobic nature of Paraburkholderia tuberum DUS833 suggests its ecological role in environments where oxygen is readily available, potentially contributing to nutrient cycling and interactions with other microbial communities. The flagella enable this strain to navigate its habitat effectively, which may be significant for its survival and functional roles in various ecosystems. Overall, the traits of Paraburkholderia tuberum DUS833 highlight its adaptation to aerobic conditions and its potential significance in ecological processes, emphasizing the importance of understanding microbial diversity and function in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia tuberum
Strainstrain DUS833

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Aspalathus sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia tuberum strain DUS833 genome assembly, contig:

Gene Summary

Adenine Count

1662329 bp

Thymine Count

1658201 bp

Guanine Count

2825834 bp

Cytosine Count

2830944 bp

Genome Length

8977308 bp

Protein-coding Genes

7763 genes

Non-Coding Genes

220 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vanillate demethylase subunit aSAMN05445850_7430Not AvailableNegative7780104 - 778118640082.6
protocatechuate 4,5-dioxygenase alpha subunitSAMN05445850_7431Not AvailableNegative7781207 - 778156614135.9
protocatechuate 4,5-dioxygenase beta subunitSAMN05445850_7432Not AvailableNegative7781577 - 778246433014.5
vanillate o-demethylase monooxygenase subunitSAMN05445850_7433Not AvailableNegative7782535 - 778357238663.9
vanillate o-demethylase ferredoxin subunitSAMN05445850_7434Not AvailableNegative7783593 - 778469640692.6
transcriptional regulator, gntr familySAMN05445850_7435Not AvailablePositive7784759 - 778545725653.9
snoal-like domain-containing proteinSAMN05445850_7436Not AvailableNegative7785482 - 778593416516.7
pimeloyl-acp methyl ester carboxylesteraseSAMN05445850_7437Not AvailableNegative7785938 - 778666326589.0
4-oxalomesaconate hydrataseSAMN05445850_7438Not AvailablePositive7786924 - 778794938300.8
4-carboxy-4-hydroxy-2-oxoadipate aldolaseSAMN05445850_7439Not AvailablePositive7787951 - 778863424101.3

Displaying genes 6951 – 6960 of 7983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.