Halopelagius longus strain CGMCC 1.12397

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halopelagius

Description

Halopelagius longus strain CGMCC 1.12397 is characterized by possessing a single replicon, which suggests a streamlined genomic organization. The accession number for this strain is FNKQ00000000.1, providing a reference for further genomic studies and comparisons within the Halopelagius genus. As a member of the Halopelagius genus, this strain is likely adapted to marine environments, given the ecological niche typically occupied by members of this group. The presence of a single replicon may indicate specific evolutionary advantages, such as efficient replication and regulation in its aquatic habitat. The genomic data associated with Halopelagius longus can facilitate a deeper understanding of its metabolic pathways and ecological interactions. Studies on this strain could reveal insights into its role in marine ecosystems, particularly concerning nutrient cycling and interactions with other microorganisms. These characteristics underscore the importance of Halopelagius longus strain CGMCC 1.12397 in microbiological research and its potential contributions to our understanding of marine microbiomes.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalopelagius
SpeciesHalopelagius longus
Strainstrain CGMCC 1.12397

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopelagius longus strain CGMCC 1.12397 genome assembly, contig:

Gene Summary

Adenine Count

662177 bp

Thymine Count

665245 bp

Guanine Count

1271927 bp

Cytosine Count

1272402 bp

Genome Length

3871751 bp

Protein-coding Genes

3803 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-alanine-dl-glutamate epimeraseSAMN05216278_3124Not AvailablePositive2983055 - 298423643574.3
predicted dehydrogenaseSAMN05216278_3125Not AvailablePositive2984233 - 298533040120.7
l-fuconolactonaseSAMN05216278_3126Not AvailablePositive2985387 - 298625333047.6
ribose transport system substrate-binding proteinSAMN05216278_3127Not AvailablePositive2986350 - 298754942938.4
monosaccharide abc transporter membrane protein, cut2 familySAMN05216278_3128Not AvailablePositive2987595 - 298859934566.3
monosaccharide abc transporter atp-binding protein, cut2 familySAMN05216278_3129Not AvailablePositive2988596 - 298939329020.1
alpha-l-fucosidaseSAMN05216278_3130Not AvailableNegative2989409 - 299114264065.1
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN05216278_3131Not AvailableNegative2991260 - 299225837456.9
l-rhamnose mutarotaseSAMN05216278_3132Not AvailableNegative2992348 - 299269213182.0
tryptophanyl-trna synthetaseSAMN05216278_3133Not AvailablePositive2993630 - 299481144358.6

Displaying genes 3101 – 3110 of 3852 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.