Halopelagius longus strain CGMCC 1.12397

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halopelagius

Description

Halopelagius longus strain CGMCC 1.12397 is characterized by possessing a single replicon, which suggests a streamlined genomic organization. The accession number for this strain is FNKQ00000000.1, providing a reference for further genomic studies and comparisons within the Halopelagius genus. As a member of the Halopelagius genus, this strain is likely adapted to marine environments, given the ecological niche typically occupied by members of this group. The presence of a single replicon may indicate specific evolutionary advantages, such as efficient replication and regulation in its aquatic habitat. The genomic data associated with Halopelagius longus can facilitate a deeper understanding of its metabolic pathways and ecological interactions. Studies on this strain could reveal insights into its role in marine ecosystems, particularly concerning nutrient cycling and interactions with other microorganisms. These characteristics underscore the importance of Halopelagius longus strain CGMCC 1.12397 in microbiological research and its potential contributions to our understanding of marine microbiomes.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalopelagius
SpeciesHalopelagius longus
Strainstrain CGMCC 1.12397

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopelagius longus strain CGMCC 1.12397 genome assembly, contig:

Gene Summary

Adenine Count

662177 bp

Thymine Count

665245 bp

Guanine Count

1271927 bp

Cytosine Count

1272402 bp

Genome Length

3871751 bp

Protein-coding Genes

3803 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogen fixation protein nifuSAMN05216278_2901Not AvailablePositive2755480 - 275590215328.9
dna repair protein radaSAMN05216278_2902Not AvailableNegative2756067 - 275709837488.9
hypothetical proteinSAMN05216278_2903Not AvailableNegative2757371 - 275797622717.9
heat shock protein. metallo peptidase. merops family m48bSAMN05216278_2904Not AvailableNegative2757981 - 275885032227.3
nucleoside-diphosphate-sugar epimeraseSAMN05216278_2905Not AvailablePositive2758901 - 275981832690.7
nonsense-mediated mrna decay protein 3SAMN05216278_2906Not AvailablePositive2759947 - 276107441562.8
uncharacterised protein family (upf0175)SAMN05216278_2907Not AvailableNegative2761090 - 27612846692.85
hypothetical proteinSAMN05216278_2908Not AvailablePositive2761539 - 27616283318.25
rad3-related dna helicaseSAMN05216278_2909Not AvailableNegative2761625 - 276348168572.1
hypothetical proteinSAMN05216278_2910Not AvailableNegative2763753 - 27640109429.48

Displaying genes 2881 – 2890 of 3852 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.