Phyllobacterium sp. YR620

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium sp. YR620 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of Phyllobacterium sp. YR620 is accessible under the accession number FNJP00000000.1, which provides a resource for further genomic analyses and studies. The Gram-negative classification suggests that Phyllobacterium sp. YR620 has a distinctive cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. The rod shape of Phyllobacterium sp. YR620 may also play a role in its motility and nutrient acquisition, facilitating its survival in diverse ecological niches. As a member of the Phyllobacterium genus, it is likely to engage in various ecological interactions, potentially including nitrogen fixation or other symbiotic relationships, although specific metabolic capabilities are not detailed in the provided evidence. In summary, the characteristics of Phyllobacterium sp. YR620, including its Gram-negative nature, rod shape, and single replicon, suggest it is well-adapted to its ecological niche. Understanding these traits can provide insights into its role in microbial ecosystems and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium sp. YR620
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium sp. YR620 genome assembly, contig: Ga0115492_112,

Gene Summary

Adenine Count

940903 bp

Thymine Count

942487 bp

Guanine Count

1361754 bp

Cytosine Count

1346602 bp

Genome Length

4591746 bp

Protein-coding Genes

4352 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap-type mannitol/chloroaromatic compound transport system, small permease componentSAMN05428967_0013Not AvailableNegative11556 - 1214021555.7
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05428967_0014Not AvailablePositive12378 - 1315426986.6
amino acid/amide abc transporter membrane protein 1, haat familySAMN05428967_0015Not AvailableNegative13151 - 1405032115.0
conserved protein containing a zn-ribbon-like motif, possibly rna-bindingSAMN05428967_0016Not AvailablePositive14115 - 1472322841.2
hypothetical proteinSAMN05428967_0017Not AvailablePositive14716 - 1521918437.3
diguanylate cyclase/phosphodiesteraseSAMN05428967_0018Not AvailablePositive15387 - 1769083794.2
protein of unknown functionSAMN05428967_0019Not AvailablePositive17810 - 179565034.74
aa3 type cytochrome c oxidase subunit ivSAMN05428967_0020Not AvailablePositive18094 - 183158027.78
nad(p) transhydrogenase subunit alphaSAMN05428967_0021Not AvailablePositive18472 - 1977945171.8
nad(p) transhydrogenase subunit alphaSAMN05428967_0022Not AvailablePositive19779 - 2018914258.7

Displaying genes 81 – 90 of 4443 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.