Phyllobacterium sp. YR620

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Phyllobacterium

Description

Phyllobacterium sp. YR620 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of Phyllobacterium sp. YR620 is accessible under the accession number FNJP00000000.1, which provides a resource for further genomic analyses and studies. The Gram-negative classification suggests that Phyllobacterium sp. YR620 has a distinctive cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature often influences the bacterium's interactions with its environment, including its susceptibility to antibiotics and its ability to form biofilms. The rod shape of Phyllobacterium sp. YR620 may also play a role in its motility and nutrient acquisition, facilitating its survival in diverse ecological niches. As a member of the Phyllobacterium genus, it is likely to engage in various ecological interactions, potentially including nitrogen fixation or other symbiotic relationships, although specific metabolic capabilities are not detailed in the provided evidence. In summary, the characteristics of Phyllobacterium sp. YR620, including its Gram-negative nature, rod shape, and single replicon, suggest it is well-adapted to its ecological niche. Understanding these traits can provide insights into its role in microbial ecosystems and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusPhyllobacterium
SpeciesPhyllobacterium sp. YR620
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phyllobacterium sp. YR620 genome assembly, contig: Ga0115492_112,

Gene Summary

Adenine Count

940903 bp

Thymine Count

942487 bp

Guanine Count

1361754 bp

Cytosine Count

1346602 bp

Genome Length

4591746 bp

Protein-coding Genes

4352 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase involved in cell wall bisynthesisSAMN05428967_4409Not AvailablePositive4514328 - 451554844808.2
trbl/virb6 plasmid conjugal transfer proteinSAMN05428967_4410Not AvailableNegative4515554 - 451672041401.1
hypothetical proteinSAMN05428967_4411Not AvailableNegative4516731 - 45169226594.32
type iv secretion system protein virb4SAMN05428967_4412Not AvailableNegative4516919 - 451934890698.5
type iv secretion system protein virb3SAMN05428967_4413Not AvailableNegative4519345 - 451964411101.8
type iv secretion system protein virb2SAMN05428967_4414Not AvailableNegative4519794 - 452009310369.9
transglycosylase slt domain-containing proteinSAMN05428967_4415Not AvailableNegative4520099 - 452077024029.8
type iv secretion system protein virb11SAMN05428967_4416Not AvailableNegative4520767 - 452186439760.1
type iv secretion system protein virb10SAMN05428967_4417Not AvailableNegative4521898 - 452323548017.8
type iv secretion system protein virb9SAMN05428967_4418Not AvailableNegative4523240 - 452404630012.9

Displaying genes 4401 – 4410 of 4443 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.