Pseudomonas guguanensis strain JCM 18416

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Pseudomonas guguanensis strain JCM 18416 is a Gram-negative bacterium characterized by its rod shape and the presence of true flagella, which enable motility. This strain is aerobic, requiring oxygen for its growth and metabolic processes. Pseudomonas guguanensis has a single replicon, which indicates that its genetic material is organized into one circular chromosome. The genomic information for this strain is available under the accession number FNJJ00000000.1. In terms of its ecological role, Pseudomonas species are commonly known for their versatility and adaptability in various environments. They are often found in soil, water, and plant-associated habitats, where they play significant roles in nutrient cycling and the degradation of organic compounds. This particular strain may contribute to these ecological functions, although specific interactions and impacts in its natural habitat require further investigation. The aerobic nature of Pseudomonas guguanensis suggests a potential involvement in aerobic processes, including the breakdown of pollutants in oxygen-rich environments, highlighting the importance of this bacterium in bioremediation and environmental sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas guguanensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas guguanensis strain JCM 18416
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas guguanensis strain JCM 18416 genome assembly, contig:

Gene Summary

Adenine Count

911742 bp

Thymine Count

905531 bp

Guanine Count

1626338 bp

Cytosine Count

1634250 bp

Genome Length

5084171 bp

Protein-coding Genes

4561 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerol-3-phosphate dehydrogenaseSAMN05216213_102451Not AvailableNegative1013166 - 101434141758.5
small multidrug resistance pumpSAMN05216213_102452Not AvailableNegative1014449 - 101478111552.8
dna-binding transcriptional regulator, lysr familySAMN05216213_102453Not AvailablePositive1014871 - 101575832690.2
3-deoxy-d-manno-octulosonic-acid transferaseSAMN05216213_102454Not AvailablePositive1015802 - 101708246679.0
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5SAMN05216213_1032Not AvailableNegative1017920 - 101937751027.0
voltage-gated potassium channelSAMN05216213_1033Not AvailableNegative1019463 - 102032932239.9
rnd family efflux transporter, mfp subunitSAMN05216213_1034Not AvailablePositive1020818 - 102189739225.0
multidrug efflux pump subunit acrbSAMN05216213_1035Not AvailablePositive1021902 - 1024946110613.0
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN05216213_1036Not AvailablePositive1024943 - 102640651713.8
dna topoisomerase-1SAMN05216213_1037Not AvailableNegative1026626 - 102765139063.2

Displaying genes 971 – 980 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.