Pseudomonas guguanensis strain JCM 18416

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Pseudomonas guguanensis strain JCM 18416 is a Gram-negative bacterium characterized by its rod shape and the presence of true flagella, which enable motility. This strain is aerobic, requiring oxygen for its growth and metabolic processes. Pseudomonas guguanensis has a single replicon, which indicates that its genetic material is organized into one circular chromosome. The genomic information for this strain is available under the accession number FNJJ00000000.1. In terms of its ecological role, Pseudomonas species are commonly known for their versatility and adaptability in various environments. They are often found in soil, water, and plant-associated habitats, where they play significant roles in nutrient cycling and the degradation of organic compounds. This particular strain may contribute to these ecological functions, although specific interactions and impacts in its natural habitat require further investigation. The aerobic nature of Pseudomonas guguanensis suggests a potential involvement in aerobic processes, including the breakdown of pollutants in oxygen-rich environments, highlighting the importance of this bacterium in bioremediation and environmental sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas guguanensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas guguanensis strain JCM 18416
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas guguanensis strain JCM 18416 genome assembly, contig:

Gene Summary

Adenine Count

911742 bp

Thymine Count

905531 bp

Guanine Count

1626338 bp

Cytosine Count

1634250 bp

Genome Length

5084171 bp

Protein-coding Genes

4561 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulator, mexef-oprn operon transcriptional activatorSAMN05216213_110205Not AvailablePositive3535333 - 353624733310.3
membrane fusion protein, multidrug efflux systemSAMN05216213_110206Not AvailablePositive3536533 - 353777144595.0
multidrug efflux pumpSAMN05216213_110207Not AvailablePositive3537799 - 3540978115124.0
outer membrane protein, multidrug efflux systemSAMN05216213_110208Not AvailablePositive3540975 - 354236350575.6
hypothetical proteinSAMN05216213_1111Not AvailableNegative3543044 - 354340913336.0
cytochrome c-type biogenesis protein ccmhSAMN05216213_1112Not AvailableNegative3543406 - 354461744056.6
cytochrome c-type biogenesis protein ccmhSAMN05216213_1113Not AvailableNegative3544614 - 354524923466.5
cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbeSAMN05216213_1114Not AvailableNegative3545246 - 354578820244.6
cytochrome c-type biogenesis protein ccmfSAMN05216213_1115Not AvailableNegative3545785 - 354775872107.2
cytochrome c-type biogenesis protein ccmeSAMN05216213_1116Not AvailableNegative3547755 - 354824317548.1

Displaying genes 3241 – 3250 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.