Pseudomonas guguanensis strain JCM 18416

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Pseudomonas guguanensis strain JCM 18416 is a Gram-negative bacterium characterized by its rod shape and the presence of true flagella, which enable motility. This strain is aerobic, requiring oxygen for its growth and metabolic processes. Pseudomonas guguanensis has a single replicon, which indicates that its genetic material is organized into one circular chromosome. The genomic information for this strain is available under the accession number FNJJ00000000.1. In terms of its ecological role, Pseudomonas species are commonly known for their versatility and adaptability in various environments. They are often found in soil, water, and plant-associated habitats, where they play significant roles in nutrient cycling and the degradation of organic compounds. This particular strain may contribute to these ecological functions, although specific interactions and impacts in its natural habitat require further investigation. The aerobic nature of Pseudomonas guguanensis suggests a potential involvement in aerobic processes, including the breakdown of pollutants in oxygen-rich environments, highlighting the importance of this bacterium in bioremediation and environmental sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas guguanensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas guguanensis strain JCM 18416
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas guguanensis strain JCM 18416 genome assembly, contig:

Gene Summary

Adenine Count

911742 bp

Thymine Count

905531 bp

Guanine Count

1626338 bp

Cytosine Count

1634250 bp

Genome Length

5084171 bp

Protein-coding Genes

4561 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
choline-sulfataseSAMN05216213_108111Not AvailablePositive2917935 - 291944657275.1
glycine betaine/proline transport system substrate-binding proteinSAMN05216213_108112Not AvailablePositive2919519 - 292043933063.4
sulfate permease, sulp familySAMN05216213_108113Not AvailablePositive2921074 - 292264556222.2
shikimate dehydrogenaseSAMN05216213_108114Not AvailableNegative2922852 - 292367329090.0
coproporphyrinogen oxidaseSAMN05216213_108115Not AvailableNegative2923781 - 292469534511.4
nadph2:quinone reductaseSAMN05216213_108116Not AvailablePositive2924839 - 292581634256.9
translation factor sua5SAMN05216213_108117Not AvailableNegative2925955 - 292651220331.3
dna protecting protein dpraSAMN05216213_108118Not AvailableNegative2926580 - 292769839058.9
nucleoid-associated protein ygau, contains bon and lysm domainsSAMN05216213_108119Not AvailableNegative2927780 - 292881738016.5
peptide deformylaseSAMN05216213_108120Not AvailablePositive2928971 - 292947719327.3

Displaying genes 2681 – 2690 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.