Pseudomonas guguanensis strain JCM 18416

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Pseudomonas guguanensis strain JCM 18416 is a Gram-negative bacterium characterized by its rod shape and the presence of true flagella, which enable motility. This strain is aerobic, requiring oxygen for its growth and metabolic processes. Pseudomonas guguanensis has a single replicon, which indicates that its genetic material is organized into one circular chromosome. The genomic information for this strain is available under the accession number FNJJ00000000.1. In terms of its ecological role, Pseudomonas species are commonly known for their versatility and adaptability in various environments. They are often found in soil, water, and plant-associated habitats, where they play significant roles in nutrient cycling and the degradation of organic compounds. This particular strain may contribute to these ecological functions, although specific interactions and impacts in its natural habitat require further investigation. The aerobic nature of Pseudomonas guguanensis suggests a potential involvement in aerobic processes, including the breakdown of pollutants in oxygen-rich environments, highlighting the importance of this bacterium in bioremediation and environmental sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas guguanensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas guguanensis strain JCM 18416
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas guguanensis strain JCM 18416 genome assembly, contig:

Gene Summary

Adenine Count

911742 bp

Thymine Count

905531 bp

Guanine Count

1626338 bp

Cytosine Count

1634250 bp

Genome Length

5084171 bp

Protein-coding Genes

4561 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycolate phosphatase, had superfamilySAMN05216213_104219Not AvailableNegative1703567 - 170423224169.4
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)SAMN05216213_104220Not AvailableNegative1704240 - 170498627710.1
4-hydroxy 2-oxovalerate aldolaseSAMN05216213_104221Not AvailableNegative1704999 - 170660658954.7
hypothetical proteinSAMN05216213_104222Not AvailableNegative1706648 - 170799449901.4
hypothetical proteinSAMN05216213_104223Not AvailablePositive1708178 - 17083426631.24
rhamnan synthesis protein fSAMN05216213_104224Not AvailableNegative1708512 - 170978348815.2
hypothetical proteinSAMN05216213_104225Not AvailableNegative1709884 - 171035116909.2
lipopolysaccharide transport system atp-binding proteinSAMN05216213_104226Not AvailableNegative1710381 - 171107925042.2
lipopolysaccharide transport system permease proteinSAMN05216213_104227Not AvailableNegative1711079 - 171237148279.5
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN05216213_104228Not AvailableNegative1712545 - 171309020482.2

Displaying genes 1611 – 1620 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.