Albidiferax sp. OV413

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Albidiferax sp. OV413 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This species contains a single replicon, indicating it has a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Albidiferax sp. OV413 is available under the accession FNJA00000000.1, which facilitates further research and exploration into its biological properties. The morphological characteristics of Albidiferax sp. OV413 align with those of other members of the Albidiferax genus, known for their ecological roles in particular environments. While specific ecological interactions of Albidiferax sp. OV413 are not detailed, the motility conferred by its flagella may enable it to navigate through diverse habitats, potentially allowing it to exploit various ecological niches. This trait could be particularly beneficial in competitive environments where movement toward nutrient sources or away from harmful conditions is crucial for survival. Overall, the traits of Albidiferax sp. OV413 suggest a bacterium well-adapted for a dynamic ecological role, possibly contributing to biogeochemical processes in its environment. Understanding this organism further may provide insights into its ecological significance and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. OV413
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Albidiferax sp. OV413
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albidiferax sp. OV413 genome assembly, contig: Ga0066711_123,

Gene Summary

Adenine Count

1064911 bp

Thymine Count

1038556 bp

Guanine Count

1787662 bp

Cytosine Count

1845127 bp

Genome Length

5736266 bp

Protein-coding Genes

5155 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
osmoprotectant transport system permease proteinSAMN05216303_104390Not AvailableNegative3569957 - 357058022027.9
histidine ammonia-lyaseSAMN05216303_104391Not AvailableNegative3570588 - 357211152779.9
osmoprotectant transport system substrate-binding proteinSAMN05216303_104392Not AvailableNegative3572119 - 357300032590.9
ornithine cyclodeaminaseSAMN05216303_104393Not AvailableNegative3573181 - 357419437167.7
exodeoxyribonuclease iiiSAMN05216303_104394Not AvailablePositive3574351 - 357512129090.9
formyl-coa transferaseSAMN05216303_104395Not AvailablePositive3575185 - 357638141920.4
hypothetical proteinSAMN05216303_104396Not AvailableNegative3576484 - 35767418098.76
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216303_104397Not AvailableNegative3576969 - 357963897190.5
nitrogen metabolism transcriptional regulator, ntrc, fis familySAMN05216303_104398Not AvailableNegative3579885 - 358141756235.8
signal transduction histidine kinase, nitrogen specific, ntrbSAMN05216303_104399Not AvailableNegative3581456 - 358253240061.0

Displaying genes 3301 – 3310 of 5247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.