Albidiferax sp. OV413

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Albidiferax sp. OV413 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This species contains a single replicon, indicating it has a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Albidiferax sp. OV413 is available under the accession FNJA00000000.1, which facilitates further research and exploration into its biological properties. The morphological characteristics of Albidiferax sp. OV413 align with those of other members of the Albidiferax genus, known for their ecological roles in particular environments. While specific ecological interactions of Albidiferax sp. OV413 are not detailed, the motility conferred by its flagella may enable it to navigate through diverse habitats, potentially allowing it to exploit various ecological niches. This trait could be particularly beneficial in competitive environments where movement toward nutrient sources or away from harmful conditions is crucial for survival. Overall, the traits of Albidiferax sp. OV413 suggest a bacterium well-adapted for a dynamic ecological role, possibly contributing to biogeochemical processes in its environment. Understanding this organism further may provide insights into its ecological significance and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. OV413
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Albidiferax sp. OV413
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albidiferax sp. OV413 genome assembly, contig: Ga0066711_123,

Gene Summary

Adenine Count

1064911 bp

Thymine Count

1038556 bp

Guanine Count

1787662 bp

Cytosine Count

1845127 bp

Genome Length

5736266 bp

Protein-coding Genes

5155 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine transport system substrate-binding proteinSAMN05216303_104198Not AvailableNegative3370480 - 337150236525.1
membrane-associated proteinSAMN05216303_104200Not AvailableNegative3371769 - 337243724693.9
nicotinamidase-related amidaseSAMN05216303_104201Not AvailablePositive3372509 - 337332729454.8
hypothetical proteinSAMN05216303_104202Not AvailablePositive3373438 - 337394117933.4
superoxide dismutase, fe-mn familySAMN05216303_104203Not AvailablePositive3373966 - 337457722139.9
zinc transporter, zip familySAMN05216303_104204Not AvailablePositive3374599 - 337550731189.7
lysr family transcriptional regulator, cys regulon transcriptional activatorSAMN05216303_104205Not AvailablePositive3375734 - 337667834550.5
fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase familySAMN05216303_104206Not AvailablePositive3376792 - 337814450029.4
putative acetyltransferaseSAMN05216303_104207Not AvailablePositive3378225 - 337876118346.8
hypothetical proteinSAMN05216303_104208Not AvailableNegative3379230 - 337988022324.9

Displaying genes 3111 – 3120 of 5247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.