Albidiferax sp. OV413

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Albidiferax sp. OV413 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests it has the capability for motility. This species contains a single replicon, indicating it has a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Albidiferax sp. OV413 is available under the accession FNJA00000000.1, which facilitates further research and exploration into its biological properties. The morphological characteristics of Albidiferax sp. OV413 align with those of other members of the Albidiferax genus, known for their ecological roles in particular environments. While specific ecological interactions of Albidiferax sp. OV413 are not detailed, the motility conferred by its flagella may enable it to navigate through diverse habitats, potentially allowing it to exploit various ecological niches. This trait could be particularly beneficial in competitive environments where movement toward nutrient sources or away from harmful conditions is crucial for survival. Overall, the traits of Albidiferax sp. OV413 suggest a bacterium well-adapted for a dynamic ecological role, possibly contributing to biogeochemical processes in its environment. Understanding this organism further may provide insights into its ecological significance and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. OV413
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Albidiferax sp. OV413
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Albidiferax sp. OV413 genome assembly, contig: Ga0066711_123,

Gene Summary

Adenine Count

1064911 bp

Thymine Count

1038556 bp

Guanine Count

1787662 bp

Cytosine Count

1845127 bp

Genome Length

5736266 bp

Protein-coding Genes

5155 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxythreonine-4-phosphate dehydrogenaseSAMN05216303_10498Not AvailablePositive3265658 - 326668335893.9
3-oxoacyl-[acyl-carrier protein] reductaseSAMN05216303_10499Not AvailablePositive3266680 - 326745926421.5
4-hydroxy-2-oxoheptanedioate aldolaseSAMN05216303_104100Not AvailablePositive3267570 - 326834326924.5
alkylhydroperoxidase ahpd family core domain-containing proteinSAMN05216303_104101Not AvailableNegative3268416 - 326887417046.4
rna polymerase sigma-70 factor, ecf subfamilySAMN05216303_104102Not AvailableNegative3268967 - 326984232372.8
protein of unknown functionSAMN05216303_104103Not AvailableNegative3269904 - 32701649777.72
thioredoxin reductaseSAMN05216303_104104Not AvailableNegative3270317 - 327121930735.9
dna-binding transcriptional regulator, iscr familySAMN05216303_104105Not AvailableNegative3271209 - 327167016259.6
2-dehydropantoate 2-reductaseSAMN05216303_104106Not AvailablePositive3271828 - 327275132189.9
periplasmic sensor diguanylate cyclase/phosphodiesteraseSAMN05216303_104107Not AvailableNegative3272759 - 327530593948.4

Displaying genes 3011 – 3020 of 5247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.